Publications (accordéon)

Publications

Journal articles

2021

ref_biblio
Chloe Audebert, Daphné Laubreton, Christophe Arpin, Olivier Gandrillon, Jacqueline Marvel, et al.. Modeling and characterization of inter-individual variability in CD8 T cell responses in mice. In Silico Biology, 2021, 14 (1-2), pp.13-39. ⟨10.3233/ISB-200205⟩. ⟨hal-03136073⟩
Accès au texte intégral et bibtex
https://hal.sorbonne-universite.fr/hal-03136073/file/isb-prepress_isb--1--1-isb200205_isb--1-isb200205.pdf BibTex
ref_biblio
Benjamin Charlier, Jean Feydy, Joan Glaunès, François-David Collin, Ghislain Durif. Kernel Operations on the GPU, with Autodiff,without Memory Overflows. Journal of Machine Learning Research, 2021, 22 (74), pp.1-6. ⟨hal-02517462v2⟩
Accès au texte intégral et bibtex
https://hal.science/hal-02517462/file/KeOps_2021.pdf BibTex
ref_biblio
Carlotta Donadello, Thi Nhu Thao Nguyen, Ulrich Razafison. On the mathematical modeling of vole populations spatial dynamics via transport equations on a graph. Applied Mathematics and Computation, 2021, 396, pp.125885. ⟨10.1016/j.amc.2020.125885⟩. ⟨hal-02908168v2⟩
Accès au texte intégral et bibtex
https://hal.science/hal-02908168/file/graph_voles_v3.pdf BibTex
ref_biblio
Ronan Duchesne, Anissa Guillemin, Olivier Gandrillon, Fabien Crauste. Practical identifiability in the frame of nonlinear mixed effects models: the example of the in vitro erythropoiesis. BMC Bioinformatics, 2021, pp.1-21. ⟨10.1186/s12859-021-04373-4⟩. ⟨hal-03364480⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03364480/file/Duchesne%20et%20al.%20-%202021%20-%20Practical%20identifiability%20in%20the%20frame%20of%20nonlinea.pdf BibTex
ref_biblio
Gloria Faccanoni, Bérénice Grec, Yohan Penel. A homogeneous relaxation low Mach number model. ESAIM: Mathematical Modelling and Numerical Analysis, 2021, 55 (4), pp.1569 - 1598. ⟨10.1051/m2an/2021032⟩. ⟨hal-03140592v2⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03140592/file/m2an210024.pdf BibTex
ref_biblio
Alexis Guyot, Ana B Graciano Fouquier, Emilie Gerardin, Marie Chupin, Joan Glaunès, et al.. A Diffeomorphic Vector Field Approach to Analyze the Thickness of the Hippocampus from 7T MRI. IEEE Transactions on Biomedical Engineering, 2021, 68 (2), pp.393-403. ⟨10.1109/TBME.2020.2999941⟩. ⟨hal-02359660v2⟩
Accès au texte intégral et bibtex
https://inria.hal.science/hal-02359660/file/guyot2020_ThicknessHippo7T_postprint.pdf BibTex
ref_biblio
Thomas Leblé, Ofer Zeitouni. A local CLT for linear statistics of 2D Coulomb gases. Markov Processes And Related Fields, 2021, 27 (4). ⟨hal-03432412⟩
Accès au bibtex
https://arxiv.org/pdf/2005.12163 BibTex
ref_biblio
Elena Merino Tejero, Danial Lashgari, Rodrigo García-Valiente, Xuefeng Gao, Fabien Crauste, et al.. Multiscale Modeling of Germinal Center Recapitulates the Temporal Transition From Memory B Cells to Plasma Cells Differentiation as Regulated by Antigen Affinity-Based Tfh Cell Help. Frontiers in Immunology, 2021, 11, ⟨10.3389/fimmu.2020.620716⟩. ⟨hal-03153711⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03153711/file/tejero-etal-2021.pdf BibTex

Conference papers

2021

ref_biblio
Pierre-Louis Antonsanti, Joan Glaunès, Thomas Benseghir, Vincent Jugnon, Irène Kaltenmark. Partial Matching in the Space of Varifolds. The 27th international conference on Information Processing in Medical Imaging (IPMI), Jun 2021, Rønne, Denmark. ⟨hal-03177620⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03177620/file/template.pdf BibTex

Preprints, Working Papers, ...

2021

ref_biblio
Giuseppe Maria M Coclite, Carlotta Donadello, Thi Nhu Thao Nguyen. AN HYPERBOLIC-PARABOLIC PREDATOR-PREY MODEL INVOLVING A VOLE POPULATION STRUCTURED IN AGE. 2021. ⟨hal-02936776v2⟩
Accès au texte intégral et bibtex
https://hal.science/hal-02936776/file/predator-prey_11feb-2.pdf BibTex

Journal articles

2020

ref_biblio
Rémy Abergel, Lionel Moisan. Algorithm 1006: Fast and accurate evaluation of a generalized incomplete gamma function. ACM Transactions on Mathematical Software, 2020, 46 (1), pp.1 -- 24. ⟨10.1145/3365983⟩. ⟨hal-01329669v2⟩
Accès au texte intégral et bibtex
https://hal.science/hal-01329669/file/gammainc_revised_preprint.pdf BibTex
ref_biblio
Irene Balelli, Chloé Pasin, Mélanie Prague, Fabien Crauste, Thierry van Effelterre, et al.. A model for establishment, maintenance and reactivation of the immune response after vaccination against Ebola virus. Journal of Theoretical Biology, 2020, 495, pp.110254. ⟨10.1016/j.jtbi.2020.110254⟩. ⟨hal-03160892v2⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03160892/file/Balelli_Manuscript.pdf BibTex
ref_biblio
Andrea Bondesan, Laurent Boudin, Marc Briant, Bérénice Grec. Stability of the spectral gap for the Boltzmann multi-species operator linearized around non-equilibrium Maxwell distributions. Communications on Pure and Applied Analysis, 2020, 19 (5), pp.2549-2573. ⟨10.3934/cpaa.2020112⟩. ⟨hal-01924308⟩
Accès au texte intégral et bibtex
https://hal.science/hal-01924308/file/Stability_Spectral_Gap_Boltzmann.pdf BibTex
ref_biblio
Laurent Boudin, Céline Grandmont, Bérénice Grec, Sébastien Martin, Amina Mecherbet, et al.. Fluid-kinetic modelling for respiratory aerosols with variable size and temperature. ESAIM: Proceedings and Surveys, 2020, 67, pp.100-119. ⟨10.1051/proc/202067007⟩. ⟨hal-02092574⟩
Accès au texte intégral et bibtex
https://hal.science/hal-02092574/file/aerosol_cemracs18.pdf BibTex
ref_biblio
David Dereudre, Adrien Hardy, Thomas Leblé, Mylène Maïda. DLR equations and rigidity for the Sine-beta process. Communications on Pure and Applied Mathematics, 2020, ⟨10.1002/cpa.21963⟩. ⟨hal-01954367⟩
Accès au texte intégral et bibtex
https://hal.science/hal-01954367/file/DLR_and_Rigidity_final.pdf BibTex
ref_biblio
Simon Labarthe, Béatrice Laroche, Thi Nhu Tao Nguyen, Bastien Polizzi, Florian Patout, et al.. A Multi-Scale Epidemic Model of Salmonella Infection With Heterogeneous Shedding. ESAIM: Proceedings and Surveys, 2020, 67, pp.261-284. ⟨10.1051/proc/202067015⟩. ⟨hal-02043742v2⟩
Accès au texte intégral et bibtex
https://hal.science/hal-02043742/file/ProceedingFinal.pdf BibTex

Conference papers

2020

ref_biblio
Pierre-Louis Antonsanti, Thomas Benseghir, Vincent Jugnon, Joan Glaunès. Database Annotation with few Examples: An Atlas-based Framework using Diffeomorphic Registration of 3D Trees. Medical Image Computing and Computer Assisted Intervention – MICCAI 2020, Oct 2020, Lima, Peru. pp.160-170. ⟨hal-02949367⟩
Accès au texte intégral et bibtex
https://hal.science/hal-02949367/file/MICCAI_2020.pdf BibTex

Book sections

2020

ref_biblio
Nicolas Charon, Benjamin Charlier, Joan Glaunès, Pietro Gori, Pierre Roussillon. Fidelity metrics between curves and surfaces: currents, varifolds, and normal cycles. Riemannian Geometric Statistics in Medical Image Analysis, Elsevier, pp.441-477, 2020, ⟨10.1016/B978-0-12-814725-2.00021-2⟩. ⟨hal-02341029⟩
Accès au bibtex
BibTex

Patents

2020

ref_biblio
Rémy Abergel, Andrés Almansa, Gwendoline Blanchet, Christophe Latry, Lionel Moisan. Procédé de construction d’un signal ou d’une image fusionné(e) haute résolution à partir d’une pluralité de signaux ou d’une pluralité d’images basse résolution. France, N° de brevet: 3111462. 2020. ⟨hal-03787312⟩
Accès au bibtex
BibTex

Preprints, Working Papers, ...

2020

ref_biblio
Florent Bekerman, Thomas Leblé, Sylvia Serfaty. CLT FOR FLUCTUATIONS OF BETA-ENSEMBLES WITH GENERAL POTENTIAL. 2020. ⟨hal-03040294⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03040294/file/CLT_Fluctuations_New.pdf BibTex
ref_biblio
Matthias Erbar, Martin Huesmann, Thomas Leblé. THE ONE-DIMENSIONAL LOG-GAS FREE ENERGY HAS A UNIQUE MINIMISER. 2020. ⟨hal-03040306⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03040306/file/UniquenessMinimisersErbarHuesmannLeble.pdf BibTex
ref_biblio
Douglas P. Hardin, Thomas Leblé, Edward Saff, Sylvia Serfaty. LARGE DEVIATION PRINCIPLES FOR HYPERSINGULAR RIESZ GASES. 2020. ⟨hal-03040321⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03040321/file/Large_Deviations_Hyperuniform_Riesz_Gases.pdf BibTex
ref_biblio
Thomas Leblé, Ofer Zeitouni. A LOCAL CLT FOR LINEAR STATISTICS OF 2D COULOMB GASES. 2020. ⟨hal-03040313⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03040313/file/LocalCLT.pdf BibTex
ref_biblio
Thomas Leblé. Local microscopic behavior for 2D Coulomb gases. 2020. ⟨hal-03040308⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03040308/file/Local_Law_2DCoulomb_Leble.pdf BibTex
ref_biblio
Thomas Leblé. A Uniqueness Result for Minimizers of the 1D Log-gas Renormalized Energy. 2020. ⟨hal-03040302⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03040302/file/Minimizer_Log_Gas_Energy_Leble.pdf BibTex
ref_biblio
Thomas Leblé. Logarithmic, Coulomb and Riesz energy of point processes. 2020. ⟨hal-03040312⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03040312/file/Coulomb_energy_for_point_processes_Leble.pdf BibTex
ref_biblio
Thomas Leblé. CLT FOR FLUCTUATIONS OF LINEAR STATISTICS IN THE SINE-BETA PROCESS. 2020. ⟨hal-03040300⟩
Accès au texte intégral et bibtex
https://hal.science/hal-03040300/file/CLT_fluctuations_sine_beta.pdf BibTex

Journal articles

2019

ref_biblio
Andrea Bondesan, Laurent Boudin, Bérénice Grec. A numerical scheme for a kinetic model for mixtures in the diffusive limit using the moment method. Numerical Methods for Partial Differential Equations, 2019, 35 (3), pp.1184-1205. ⟨10.1002/num.22345⟩. ⟨hal-01727725⟩
Accès au texte intégral et bibtex
https://hal.science/hal-01727725/file/Bondesan-Boudin-Grec.pdf BibTex
ref_biblio
Laurent Boudin, Bérénice Grec, Vincent Pavan. Diffusion models for mixtures using a stiff dissipative hyperbolic formalism. Journal of Hyperbolic Differential Equations, 2019, 16 (2), pp.293--312. ⟨10.1142/S0219891619500115⟩. ⟨hal-01786824v2⟩
Accès au texte intégral et bibtex
https://hal.science/hal-01786824/file/bgp2_v2.pdf BibTex
ref_biblio
Loïs Boullu, Mostafa Adimy, Fabien Crauste, Laurent Pujo-Menjouet. Oscillations and asymptotic convergence for a delay differential equation modeling platelet production. Discrete and Continuous Dynamical Systems - Series B, 2019, 24 (6), pp.2417-2442. ⟨10.3934/dcdsb.2018259⟩. ⟨hal-01835435v2⟩
Accès au texte intégral et bibtex
https://inria.hal.science/hal-01835435/file/Boullu%20Adimy%20Crauste%20Pujo-Menjouet%20-%20arxiv%20%281%29.pdf BibTex
ref_biblio
Stéphane Dellacherie, Gloria Faccanoni, Bérénice Grec, Yohan Penel. Accurate steam-water equation of state for two-phase flow LMNC model with phase transition. Applied Mathematical Modelling, 2019, 65, pp.207-233. ⟨10.1016/j.apm.2018.07.028⟩. ⟨hal-01111730v5⟩
Accès au texte intégral et bibtex
https://hal.science/hal-01111730/file/papierTAB.pdf BibTex
ref_biblio
Ronan Duchesne, Anissa Guillemin, Fabien Crauste, Olivier Gandrillon. Calibration, Selection and Identifiability Analysis of a Mathematical Model of the in vitro Erythropoiesis in Normal and Perturbed Contexts. In Silico Biology, 2019, 13 (1-2), pp.55-69. ⟨10.3233/ISB-190471⟩. ⟨hal-02309925⟩
Accès au bibtex
BibTex
ref_biblio
Simon Girel, Christophe Arpin, Jacqueline Marvel, Olivier Gandrillon, Fabien Crauste. Model-based assessment of the Role of Uneven Partitioning of Molecular Content on Heterogeneity and Regulation of Differentiation in CD8 T-cell Immune Responses. Frontiers in Immunology, In press, pp.1-41. ⟨10.3389/fimmu.2019.00230⟩. ⟨hal-02008705⟩
Accès au texte intégral et bibtex
https://hal.science/hal-02008705/file/DeuxiemePreprintFrontiers.pdf BibTex
ref_biblio
Anissa Guillemin, Ronan Duchesne, Fabien Crauste, Sandrine Gonin-Giraud, Olivier Gandrillon. Drugs modulating stochastic gene expression affect the erythroid differentiation process. PLoS ONE, 2019, 14 (11), pp.1-19. ⟨10.1371/journal.pone.0225166⟩. ⟨hal-02375801⟩
Accès au texte intégral et bibtex
https://hal.science/hal-02375801/file/Guillemin-etal-PlosOne-2019.pdf BibTex
ref_biblio
Chenguang Liu, Rémy Abergel, Yann Gousseau, Florence Tupin. LSDSAR, a Markovian a contrario framework for line segment detection in SAR images. Pattern Recognition, 2019, 98, ⟨10.1016/j.patcog.2019.107034⟩. ⟨hal-01827482v2⟩
Accès au texte intégral et bibtex
https://hal.science/hal-01827482/file/paper.pdf BibTex
ref_biblio
Pierre Roussillon, Joan Glaunès. Representation of Surfaces with Normal Cycles. Application to Surface Registration. Journal of Mathematical Imaging and Vision, 2019, 61, pp.1069-1095. ⟨hal-01998650⟩
Accès au texte intégral et bibtex
https://hal.science/hal-01998650/file/Surface_NormCycles_v1_hal.pdf BibTex

Conference papers

2019

ref_biblio
Rémy Abergel, Loïc Denis, Florence Tupin, Saïd Ladjal, Charles-Alban Deledalle, et al.. Resolution-Preserving Speckle Reduction of SAR Images: the Benefits of Speckle Decorrelation and Targets Extraction. 2019 IEEE International Geoscience and Remote Sensing Symposium, Jul 2019, Yokohama, Japan. ⟨10.1109/IGARSS.2019.8900036⟩. ⟨hal-02148907⟩
Accès au texte intégral et bibtex
https://hal.science/hal-02148907/file/preprint_rabasardecomp.pdf BibTex

Book sections

2019

ref_biblio
Katherine Grzesik, Kevin Eng, Fabien Crauste, Sebastiano Battaglia. In Silico Methods for Studying T Cell Biology. Int. Rev. Cell. Mol. Biol. 342, Elsevier, pp.265-304, 2019, ⟨10.1016/bs.ircmb.2018.07.005⟩. ⟨hal-02237891⟩
Accès au bibtex
BibTex